STRINGSTRING
TTX_1552a protein (Thermoproteus tenax) - STRING interaction network
"TTX_1552a" - RNase P/RNase MRP subunit p29 in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1552aRNase P/RNase MRP subunit p29 (87 aa)    
Predicted Functional Partners:
rpl29p
Putative secreted protein (69 aa)
              0.898
rps3
30S ribosomal protein S3p; Binds the lower part of the 30S subunit head (216 aa)
         
  0.845
rpl2
50S ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (243 aa)
         
  0.733
TTX_0939
Hypothetical protein (97 aa)
         
  0.698
truB
tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (338 aa)
         
  0.630
rps5
Ribosomal protein S5p/L7e; With S4 and S12 plays an important role in translational accuracy (203 aa)
         
  0.611
rpl3
50S ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (339 aa)
         
  0.608
rpl22
Ribosomal protein L22p; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (176 aa)
         
  0.607
TTX_1417
Hypothetical protein (270 aa)
         
  0.599
rps4e
30S ribosomal protein S4e (235 aa)
              0.597
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (8%) [HD]