STRINGSTRING
endA protein (Thermoproteus tenax) - STRING interaction network
"endA" - tRNA intron endonuclease in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
endAtRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (182 aa)    
Predicted Functional Partners:
dnaG
Putative DNA primase DnaG (406 aa)
       
 
  0.999
TTX_1893
tRNA splicing endonuclease (96 aa)
       
 
  0.920
TTX_1595
Hypothetical protein (109 aa)
              0.898
TTX_1618
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (372 aa)
   
   
  0.874
glyS
glycyl-tRNA synthetase (586 aa)
              0.851
TTX_0168
polB DNA-directed DNA polymerase I (B1) (860 aa)
   
 
 
  0.803
trpS
Tryptophanyl-tRNA synthetase (375 aa)
 
     
  0.798
TTX_1917
DNA polymerase II (785 aa)
       
 
  0.737
polB2
Possible DNA-directed DNA polymerase (550 aa)
       
 
  0.737
rpoE1
DNA-directed RNA polymerase subunit E’ (189 aa)
 
   
  0.719
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (9%) [HD]