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TTX_1623 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1623" - PIN domain/Zn-ribbon domain-containing protein in Thermoproteus tenax
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1623PIN domain/Zn-ribbon domain-containing protein (166 aa)    
Predicted Functional Partners:
TTX_1624
Putative RNA-binding protein (624 aa)
              0.864
TTX_1625
Endonuclease IV (277 aa)
              0.779
truD
tRNA pseudouridine synthase D; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs (415 aa)
              0.608
TTX_1886
Hypothetical protein (201 aa)
              0.597
TTX_0736
Hypothetical protein (221 aa)
              0.597
TTX_0100
Transcriptional regulator, AsnC family (80 aa)
   
          0.513
TTX_1627
Hypothetical protein (266 aa)
              0.493
pelA
Cell division protein pelota; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (340 aa)
              0.438
TTX_0963
VirB11/GspE family type II/IV secretion system ATPase (541 aa)
   
          0.437
TTX_0745
Type II DNA topoisomerase VI subunit B (120 aa)
   
          0.432
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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