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nep1 protein (Thermoproteus tenax) - STRING interaction network
"nep1" - Hypothetical protein in Thermoproteus tenax
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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nep1Hypothetical protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA (245 aa)    
Predicted Functional Partners:
TTX_0715
Putative RNA-binding protein (173 aa)
 
  0.996
flpA
Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (235 aa)
     
  0.995
rcl1
RNA-3’-phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (361 aa)
   
  0.995
rps8e
30S ribosomal protein S8e (132 aa)
     
    0.985
TTX_1613
Nop family pre-rRNA processing protein (423 aa)
   
  0.979
rps4
30S ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (172 aa)
     
  0.976
TTX_0823
Putative exosome subunit/U3 small nucleolar ribonucleoprotein; Probably involved in the biogenesis of the ribosome (187 aa)
   
 
  0.975
rps15
30S ribosomal protein S15p (151 aa)
     
  0.967
rps4e
30S ribosomal protein S4e (235 aa)
     
    0.965
tmcA
P-loop ATPase with acetyltransferase domain; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) (787 aa)
   
      0.956
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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