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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
secE protein (Thermoproteus tenax) - STRING interaction network
"secE" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secEannotation not available (98 aa)    
Predicted Functional Partners:
secY
annotation not available (473 aa)
     
 
  0.999
secG
Preprotein translocase subunit SecG; Involved in protein export. The function of the beta subunit is unknown, but it may be involved in stabilization of the trimeric complex (56 aa)
       
 
  0.999
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (91 aa)
     
      0.996
rpl11p
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (168 aa)
   
      0.990
rpl1p
50S ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release (223 aa)
   
 
  0.990
rpl30e
annotation not available (104 aa)
     
      0.983
rpl10e
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (346 aa)
   
      0.983
rpl31e
annotation not available (91 aa)
   
 
  0.981
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (105 aa)
     
      0.975
rps25e
annotation not available (112 aa)
     
 
  0.971
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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