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STRINGSTRING
rplxa protein (Thermoproteus tenax) - STRING interaction network
"rplxa" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplxaannotation not available (83 aa)    
Predicted Functional Partners:
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (147 aa)
     
 
  0.999
rpl24e
50S ribosomal protein L24e; Binds to the 23S rRNA (63 aa)
   
 
  0.999
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (105 aa)
   
 
  0.999
rpl13p
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (174 aa)
     
 
  0.999
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (91 aa)
     
 
  0.999
rpl18e
annotation not available (122 aa)
     
 
  0.999
rpl29p
annotation not available (69 aa)
     
 
  0.999
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (83 aa)
     
 
  0.999
rpl
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (148 aa)
     
 
  0.999
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (243 aa)
     
 
  0.999
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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