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STRINGSTRING
hcaD protein (Thermoproteus tenax) - STRING interaction network
"hcaD" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcaDannotation not available (389 aa)    
Predicted Functional Partners:
ctH
annotation not available (383 aa)
   
 
  0.915
cysM
annotation not available (331 aa)
       
  0.914
TTX_1828
annotation not available (149 aa)
 
          0.913
TTX_1188
annotation not available (412 aa)
       
  0.664
dsrB
annotation not available (378 aa)
       
  0.664
TTX_0427
annotation not available (371 aa)
       
  0.664
TTX_0426
annotation not available (411 aa)
       
  0.664
TTX_0424
annotation not available (405 aa)
       
  0.664
TTX_0423
annotation not available (385 aa)
       
  0.664
rpl18p
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (203 aa)
   
        0.648
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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