STRINGSTRING
TTX_1893 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1893" - tRNA splicing endonuclease in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1893tRNA splicing endonuclease (96 aa)    
Predicted Functional Partners:
dnaG
Putative DNA primase DnaG (406 aa)
       
 
  0.927
endA
tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (182 aa)
       
 
  0.920
TTX_1892
Hypothetical protein (99 aa)
              0.871
pyk
Pyruvate kinase (446 aa)
         
  0.805
rpl2
50S ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (243 aa)
   
        0.680
cysS
Cysteinyl-tRNA synthetase (484 aa)
   
   
  0.640
trpS
Tryptophanyl-tRNA synthetase (375 aa)
         
  0.629
pheT
phenylalanyl-tRNA synthetase beta chain (519 aa)
   
   
  0.609
pheS
phenylalanyl-tRNA synthetase alpha chain (492 aa)
   
        0.608
rtcB
RtcB family protein (483 aa)
         
  0.598
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (7%) [HD]