STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFQ43480.1Hypothetical protein. (627 aa)    
Predicted Functional Partners:
AFQ43479.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
    0.951
AFQ43055.1
PFAM: Protein of unknown function (DUF3102).
  
     0.734
AFQ45232.1
PFAM: Protein of unknown function (DUF3102).
  
     0.734
AFQ45213.1
PFAM: Protein of unknown function (DUF3102).
  
     0.733
AFQ43947.1
PFAM: Protein of unknown function (DUF3102).
  
     0.732
AFQ42576.1
PFAM: Protein of unknown function (DUF3102).
  
     0.730
AFQ43534.1
PFAM: Protein of unknown function (DUF3102).
  
     0.730
AFQ44340.1
PFAM: Protein of unknown function (DUF3102).
  
     0.730
AFQ44228.1
PFAM: Protein of unknown function (DUF3102).
  
     0.729
AFQ43437.1
Hypothetical protein.
  
     0.720
Your Current Organism:
Desulfosporosinus meridiei
NCBI taxonomy Id: 768704
Other names: D. meridiei DSM 13257, Desulfosporosinus meridiei DSM 13257, Desulfosporosinus meridiei str. DSM 13257, Desulfosporosinus meridiei strain DSM 13257, Desulfosporosinus sp. S10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.