STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ88488.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (309 aa)    
Predicted Functional Partners:
EHQ88490.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
 
 0.960
EHQ87760.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
 
 0.943
EHQ88489.1
Hypothetical protein.
  
 
 0.875
EHQ90596.1
ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC-2 type transporter.
 
 
 0.798
EHQ90941.1
Hypothetical protein.
  
 0.785
EHQ88813.1
Hypothetical protein.
  
 0.783
EHQ90880.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.783
EHQ91320.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.783
EHQ89189.1
Hypothetical protein.
  
 0.759
atpD
ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.693
Your Current Organism:
Desulfosporosinus youngiae
NCBI taxonomy Id: 768710
Other names: D. youngiae DSM 17734, Desulfosporosinus youngiae DSM 17734, Desulfosporosinus youngiae JW/YJL-B18, Desulfosporosinus youngiae str. DSM 17734, Desulfosporosinus youngiae strain DSM 17734
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.