STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ89397.1PFAM: Protein of unknown function (DUF3102). (294 aa)    
Predicted Functional Partners:
EHQ88527.1
Hypothetical protein.
  
   
 0.725
EHQ87918.1
Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain.
  
     0.715
EHQ87785.1
PFAM: Protein of unknown function DUF88.
  
     0.708
EHQ88567.1
Hypothetical protein.
  
     0.697
EHQ90897.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.690
EHQ92368.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.690
EHQ89022.1
Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain.
  
     0.669
EHQ91571.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase; overlaps another CDS with the same product name.
  
     0.643
EHQ88688.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
 
     0.613
EHQ91529.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Desulfosporosinus youngiae
NCBI taxonomy Id: 768710
Other names: D. youngiae DSM 17734, Desulfosporosinus youngiae DSM 17734, Desulfosporosinus youngiae JW/YJL-B18, Desulfosporosinus youngiae str. DSM 17734, Desulfosporosinus youngiae strain DSM 17734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.