STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1135DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1172 aa)    
Predicted Functional Partners:
Malapachy_0013
Dna mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
Malapachy_2389
Dna mismatch repair protein.
 
 0.994
Malapachy_0098
Mismatch repair endonuclease pms2.
 
 0.992
Malapachy_1869
Dna mismatch repair protein.
  
 
0.979
Malapachy_1282
Msh1-dna mismatch repair mitochondrial.
  
0.979
Malapachy_2334
Vezatin domain-containing protein.
   
 0.967
Malapachy_0979
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.967
Malapachy_1092
Exo1-exonuclease which interacts with msh2p.
   
 0.952
Malapachy_0058
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.945
Malapachy_1770
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.926
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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