STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TBB8Putative SKG3 protein. (876 aa)    
Predicted Functional Partners:
A0A1W2TJD3
Putative CCR4-NOT transcription complex subunit 4.
   
   0.898
A0A1W2TR58
Putative 3-phytase.
    
 0.565
A0A1W2TPH9
Putative meiosis-specific serine threonine-protein kinase mek1.
 
  
  0.525
A0A1W2TRB5
Putative mortality factor 4-like protein 1.
    
  0.452
A0A1W2TUC4
Putative amidase.
    
  0.452
A0A1S7UKK0
Putative Golgi matrix protein.
    
  0.422
A0A1W2TBV6
Putative integral membrane protein.
    
  0.422
A0A1W2TUZ5
Putative ubiquitin family protein.
    
  0.412
A0A1W2TP07
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.400
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.