STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TBB9Putative Kin of IRRE-like protein 3. (487 aa)    
Predicted Functional Partners:
A0A1W2TD61
Putative ATP-dependent DNA helicase MPH1.
    
 0.592
A0A1W2TTH1
Putative DNA excision repair protein ERCC-4.
    
 0.556
A0A1W2TJL2
Putative DNA excision repair protein ERCC-1.
    
 0.543
A0A1W2TTK5
Ribonuclease P protein subunit.
   
 0.543
A0A1S8A618
Putative rpp14 family protein.
   
 0.541
A0A1W2TS58
Putative POPLD domain-containing protein.
    
 0.541
A0A1W2TUB5
Putative RNase P subunit p30.
    
 0.541
A0A1S8A7F1
Uncharacterized protein.
    
  0.538
A0A1W2TDV8
Putative npl4 family protein.
    
  0.537
A0A1S7ULI2
Putative RNAse P Rpr2 Rpp21 SNM1 subunit domain-containing protein.
    
 0.534
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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