STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TEV7Putative transcription factor tau subunit sfc4. (1184 aa)    
Predicted Functional Partners:
A0A1W2TVQ0
Putative transcription factor tau subunit sfc1.
   
 0.999
A0A1W2TT91
Putative brf1-like tbp-binding domain-containing protein.
    
 0.995
A0A1W2TH47
Putative myb-like DNA-binding domain-containing protein.
   
 0.983
A0A1W2TWW1
Putative tfiiic transcription initiation factor complex subunits tfc3 protein.
    
 0.975
A0A1W2TDF2
Putative WD40 repeat-like-containing domain protein.
    
 0.973
A0A1W2TQU0
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.953
A0A1W2TBQ3
Putative CPSF A subunit region.
    
   0.950
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 
 0.948
A0A1W2TC81
Putative endoribonuclease YSH1.
   
   0.947
A0A1W2TAV5
Putative mRNA cleavage and polyadenylation specificity factor complex subunit.
   
   0.945
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.