STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
A0A1W2TN19Putative geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (442 aa)    
Predicted Functional Partners:
A0A1W2TSD1
Putative fusicoccadiene synthase.
 
   
  0.946
A0A1W2TC05
Putative squalene synthase.
  
 0.895
A0A1W2TU49
Putative phytoene synthase.
  
 0.884
A0A1W2TW21
Tryptophan synthase.
    
 0.882
A0A1W2TL68
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.872
A0A1W2TWT5
Putative farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.872
A0A1W2TEC8
Putative isopentenyl-diphosphate Delta-isomerase.
  
 
 0.829
A0A1W2TG04
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.806
A0A1W2TNS9
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
  0.806
A0A1S7ULG3
Putative geranylgeranyltransferase type I alpha subunit.
     
 0.801
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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