STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TNN9Putative chromatin assembly protein. (1028 aa)    
Predicted Functional Partners:
A0A1S7UJL3
Putative chromatin remodelling complex atpase chain isw1.
    
 0.991
A0A1W2TPU1
Putative iswi chromatin-remodeling complex atpase isw2 protein.
    
 0.977
A0A1S7UIE6
Putative DNA polymerase epsilon subunit d.
    
 
 0.955
A0A1W2TNN8
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
 
      0.899
A0A1W2TDJ4
Putative U2 snRNP component prp10.
   
 0.892
A0A1S8AA85
Putative DNA polymerase V.
    
 0.885
A0A1S7UJW7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.841
A0A1W2TN71
Histone H2B; Belongs to the histone H2B family.
    
 0.804
A0A1W2TLW3
Putative DNA repair and recombination protein rad26.
    
 0.793
A0A1W2TB93
Putative chromodomain helicase.
   
 0.768
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.