STRINGSTRING
SMAC_11287 protein (Sordaria macrospora) - STRING interaction network
"SMAC_11287" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_11287Hypothetical protein (131 aa)    
Predicted Functional Partners:
SMAC_11491
Hypothetical protein (126 aa)
   
          0.505
SMAC_11003
Hypothetical protein (141 aa)
   
          0.493
SMAC_11352
Hypothetical protein (113 aa)
   
          0.492
SMAC_10923
Hypothetical protein (93 aa)
   
          0.472
SMAC_10682
Hypothetical protein (113 aa)
   
     
  0.462
SMAC_10357
Hypothetical protein (279 aa)
   
          0.440
SMAC_01198
Polyketide synthase (1989 aa)
   
   
  0.423
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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