STRINGSTRING
SMAC_11519 protein (Sordaria macrospora) - STRING interaction network
"SMAC_11519" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_11519Hypothetical protein (67 aa)    
Predicted Functional Partners:
SMAC_10240
Hypothetical protein (180 aa)
   
  0.994
SMAC_02126
Mitochondrial 54S ribosomal protein YmL23 (183 aa)
   
  0.962
SMAC_03924
60S ribosomal protein L16 (202 aa)
   
  0.962
SMAC_07251
Hypothetical protein (128 aa)
   
  0.959
SMAC_07950
Hypothetical protein (456 aa)
     
  0.958
SMAC_05557
60S ribosomal protein L5 (307 aa)
     
  0.957
SMAC_02212
Hypothetical protein (258 aa)
   
  0.954
SMAC_00356
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (312 aa)
     
  0.953
SMAC_02008
mRNA turnover protein MRT4 (255 aa)
     
  0.953
SMAC_07803
60S ribosomal protein L26 (122 aa)
     
  0.952
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (7%) [HD]