STRINGSTRING
SMAC_10487 protein (Sordaria macrospora) - STRING interaction network
"SMAC_10487" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_10487Hypothetical protein (96 aa)    
Predicted Functional Partners:
SMAC_08354
Hypothetical protein (725 aa)
   
  0.843
SMAC_01393
Hypothetical protein (304 aa)
 
 
  0.750
SMAC_06694
Hypothetical protein (242 aa)
   
 
  0.679
SMAC_06194
Hypothetical protein (317 aa)
       
  0.666
SMAC_00672
Hypothetical protein (368 aa)
   
 
  0.656
SMAC_01874
Hypothetical protein (361 aa)
   
 
  0.656
SMAC_03988
Hypothetical protein (819 aa)
   
 
  0.656
SMAC_04139
Hypothetical protein (490 aa)
   
 
  0.656
SMAC_06607
Hypothetical protein (407 aa)
   
 
  0.656
SMAC_08993
Hypothetical protein (295 aa)
   
 
  0.656
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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