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SMAC_10519 protein (Sordaria macrospora) - STRING interaction network
"SMAC_10519" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_10519Hypothetical protein (223 aa)    
Predicted Functional Partners:
SMAC_05479
Hypothetical protein (560 aa)
     
  0.810
NTH1
Base-excision repair protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (805 aa)
     
  0.810
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.765
SMAC_10327
Hypothetical protein (125 aa)
     
  0.765
SMAC_10326
Hypothetical protein (162 aa)
     
  0.765
SMAC_07714
Hypothetical protein (693 aa)
       
  0.738
SMAC_07713
Hypothetical protein (604 aa)
       
  0.738
SMAC_06758
Hypothetical protein (1075 aa)
     
  0.683
SMAC_00422
Hypothetical protein (424 aa)
     
  0.637
SMAC_05541
Hypothetical protein (415 aa)
     
  0.637
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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