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SMAC_08841 protein (Sordaria macrospora) - STRING interaction network
"SMAC_08841" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_08841Hypothetical protein (427 aa)    
Predicted Functional Partners:
SMAC_06245
Hypothetical protein (433 aa)
     
 
  0.991
ERB1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (743 aa)
     
  0.988
SMAC_04244
Hypothetical protein (677 aa)
     
      0.986
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (488 aa)
     
  0.985
SMAC_06206
Ribosome biogenesis protein BRX1 (323 aa)
     
 
  0.983
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
  0.981
SMAC_01202
Hypothetical protein (311 aa)
     
 
  0.978
SMAC_08096
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (183 aa)
     
 
  0.974
SMAC_03957
Hypothetical protein (447 aa)
     
 
  0.974
SMAC_02797
Hypothetical protein (548 aa)
     
      0.972
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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