STRINGSTRING
SMAC_04424 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04424" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04424Hypothetical protein (403 aa)    
Predicted Functional Partners:
SMAC_06223
Hypothetical protein (820 aa)
     
  0.989
SMAC_01921
40S ribosomal protein S3 (262 aa)
       
  0.970
SMAC_00898
Hypothetical protein (480 aa)
     
  0.968
SMAC_04797
Hypothetical protein (524 aa)
     
  0.944
SMAC_09134
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (323 aa)
     
  0.933
SMAC_05510
Hypothetical protein (401 aa)
     
 
  0.911
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
   
  0.900
SMAC_04437
66S preribosome component MAK16 (324 aa)
     
   
  0.898
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
   
  0.897
SMAC_03957
Hypothetical protein (447 aa)
     
        0.896
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (7%) [HD]