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SMAC_04448 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04448" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04448Hypothetical protein (212 aa)    
Predicted Functional Partners:
SMAC_02710
Mitochondrial 54S ribosomal protein YmL8 (193 aa)
     
 
  0.774
SMAC_02212
Hypothetical protein (258 aa)
     
      0.770
SMAC_01994
Hypothetical protein (372 aa)
     
      0.765
SMAC_08141
Hypothetical protein (266 aa)
     
      0.763
SMAC_04418
Mitochondrial 54S ribosomal protein YmL7/YmL5 (352 aa)
     
      0.754
SMAC_06740
Mitochondrial 54S ribosomal protein YmL9 (365 aa)
     
 
  0.749
SMAC_07044
Hypothetical protein (410 aa)
     
 
  0.748
SMAC_02126
Mitochondrial 54S ribosomal protein YmL23 (183 aa)
     
      0.745
SMAC_07045
Mitochondrial 54S ribosomal protein YmL6 (349 aa)
     
      0.745
SMAC_01702
Hypothetical protein (267 aa)
     
      0.744
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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