STRINGSTRING
SMAC_04482 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04482" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04482Hypothetical protein (979 aa)    
Predicted Functional Partners:
SMAC_03949
Hypothetical protein (532 aa)
     
 
  0.936
SMAC_04844
Hypothetical protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (214 aa)
     
 
  0.925
SMAC_03526
Hypothetical protein (1096 aa)
     
 
  0.665
SMAC_05388
Hypothetical protein (1047 aa)
     
 
  0.612
SMAC_05454
Hypothetical protein (869 aa)
     
 
  0.573
SMAC_03497
Hypothetical protein (1271 aa)
     
 
  0.565
SMAC_02502
Hypothetical protein (1028 aa)
     
 
  0.565
SMAC_02551
Hypothetical protein (944 aa)
     
 
  0.563
SMAC_04506
Hypothetical protein (406 aa)
     
 
  0.547
SMAC_07533
Hypothetical protein (778 aa)
     
      0.532
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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