STRINGSTRING
SMAC_04489 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04489" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04489Hypothetical protein (298 aa)    
Predicted Functional Partners:
SMAC_03032
Hypothetical protein (449 aa)
       
      0.749
SMAC_06280
Hypothetical protein (662 aa)
         
  0.667
SMAC_09140
Hypothetical protein (789 aa)
       
  0.650
SMAC_10038
Hypothetical protein (254 aa)
       
      0.617
SMAC_03875
Hypothetical protein (356 aa)
         
  0.610
SMAC_06622
Hypothetical protein (253 aa)
 
            0.607
SMAC_01956
Hypothetical protein (556 aa)
         
  0.540
SMAC_00657
Hypothetical protein (1805 aa)
         
  0.520
SMAC_12586
Hypothetical protein (482 aa)
     
 
  0.502
SMAC_03402
Hypothetical protein (2098 aa)
         
  0.493
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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