STRINGSTRING
SMAC_04506 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04506" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04506Hypothetical protein (406 aa)    
Predicted Functional Partners:
SMAC_04697
Hypothetical protein (1033 aa)
     
 
  0.925
SMAC_04116
HTA1 protein (143 aa)
       
 
  0.916
SMAC_08324
HTA2 protein (134 aa)
       
 
  0.915
SMAC_08323
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
 
  0.880
SMAC_04258
Hypothetical protein (515 aa)
       
 
  0.879
SMAC_06262
40S ribosomal protein S6 (239 aa)
     
 
  0.839
SMAC_02618
Hypothetical protein (327 aa)
     
 
  0.786
SMAC_04508
Myosin MYO2 (1595 aa)
 
   
 
  0.704
SMAC_05225
Hypothetical protein (1203 aa)
       
 
  0.701
SMAC_08190
Hypothetical protein (723 aa)
     
 
  0.679
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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