STRINGSTRING
SMAC_09079 protein (Sordaria macrospora) - STRING interaction network
"SMAC_09079" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_09079Hypothetical protein (245 aa)    
Predicted Functional Partners:
SMAC_01331
Hypothetical protein (878 aa)
     
      0.796
RRP36
Hypothetical protein; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (333 aa)
     
        0.772
SMAC_06302
Hypothetical protein (389 aa)
     
      0.716
SMAC_04269
Hypothetical protein (323 aa)
     
      0.716
SMAC_06598
Hypothetical protein (232 aa)
     
   
  0.712
SMAC_08096
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (183 aa)
     
        0.694
SMAC_09016
Hypothetical protein (580 aa)
     
        0.691
SMAC_07168
60S ribosome subunit biogenesis protein NOP53 (449 aa)
     
        0.680
SMAC_02139
Hypothetical protein (543 aa)
     
        0.676
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
        0.648
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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