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SMAC_06453 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06453" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06453Hypothetical protein (1478 aa)    
Predicted Functional Partners:
SMAC_07121
Hypothetical protein (328 aa)
     
 
  0.838
SMAC_08190
Hypothetical protein (723 aa)
     
        0.693
SMAC_08065
Hypothetical protein (1234 aa)
     
 
  0.625
SMAC_07257
Hypothetical protein (660 aa)
     
      0.495
SPB1
Hypothetical protein; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (833 aa)
     
 
  0.488
SMAC_06164
Hypothetical protein (522 aa)
     
 
  0.464
SMAC_07377
Hypothetical protein (1052 aa)
     
      0.431
SMAC_06237
Hypothetical protein; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1325 aa)
     
        0.426
SMAC_08888
Hypothetical protein; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits (4983 aa)
     
        0.410
SMAC_00089
Hypothetical protein (1776 aa)
     
        0.407
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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