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SMAC_07252 protein (Sordaria macrospora) - STRING interaction network
"SMAC_07252" - SKI8 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_07252SKI8 protein (357 aa)    
Predicted Functional Partners:
SMAC_08610
Hypothetical protein (1460 aa)
       
  0.989
SMAC_04581
Hypothetical protein (530 aa)
     
  0.971
SMAC_00900
Hypothetical protein (409 aa)
     
  0.970
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
       
    0.955
SMAC_02208
Hypothetical protein (493 aa)
     
  0.955
SMAC_06856
Hypothetical protein (1294 aa)
       
  0.921
SMAC_08103
Hypothetical protein (1280 aa)
       
  0.912
SMAC_04070
Hypothetical protein (1079 aa)
       
  0.858
SMAC_01032
Hypothetical protein (1182 aa)
       
 
  0.819
SMAC_01677
Mitochondria fission 1 protein (153 aa)
       
 
  0.739
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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