STRINGSTRING
SMAC_06425 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06425" - EXO1 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06425EXO1 protein (722 aa)    
Predicted Functional Partners:
SMAC_03669
MSH2 protein; Component of the post-replicative DNA mismatch repair system (MMR) (934 aa)
   
  0.960
SMAC_04895
SGS1 protein (2276 aa)
   
  0.954
SMAC_01858
Hypothetical protein (1251 aa)
     
  0.951
SMAC_00910
MLH1 protein (752 aa)
     
  0.947
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.931
SMAC_00050
MRE11 protein (718 aa)
   
  0.920
SMAC_06758
Hypothetical protein (1075 aa)
   
  0.913
SMAC_00184
RAD50 protein (1317 aa)
     
  0.904
SMAC_03385
Hypothetical protein (1750 aa)
   
  0.903
SMAC_06685
Hypothetical protein (2835 aa)
     
  0.886
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (12%) [HD]