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SMAC_06728 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06728" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06728Hypothetical protein (1223 aa)    
Predicted Functional Partners:
SMAC_04008
Hypothetical protein (775 aa)
     
  0.998
SMAC_00646
Hypothetical protein (305 aa)
     
  0.996
SMAC_03493
Hypothetical protein (871 aa)
     
  0.992
SMAC_05922
Hypothetical protein (1053 aa)
     
  0.991
SMAC_06445
Hypothetical protein (202 aa)
     
  0.989
SMAC_05963
Hypothetical protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1687 aa)
     
 
  0.885
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
 
  0.778
SMAC_03535
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1229 aa)
     
 
  0.736
SMAC_06625
Hypothetical protein (217 aa)
       
  0.724
SMAC_04852
Calcium-binding protein precursor cnx1 (576 aa)
     
 
  0.716
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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