STRINGSTRING
SMAC_12123 protein (Sordaria macrospora) - STRING interaction network
"SMAC_12123" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_12123Hypothetical protein (104 aa)    
Predicted Functional Partners:
SMAC_03243
CDC23 protein (757 aa)
     
  0.995
SMAC_00447
Hypothetical protein (1114 aa)
       
  0.995
SMAC_01925
Hypothetical protein (808 aa)
       
  0.995
SMAC_07506
APC1 protein (2084 aa)
     
  0.994
SMAC_00051
DOC1 protein (417 aa)
     
  0.994
SMAC_05407
APC5 protein (814 aa)
       
  0.994
SMAC_04064
CDC16 protein (661 aa)
       
  0.994
SMAC_05287
CDC27 protein (815 aa)
       
  0.994
hct1
CDC20/HCT1 protein (603 aa)
       
  0.994
SMAC_03927
Hypothetical protein (235 aa)
     
  0.958
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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