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SMAC_04534 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04534" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04534Hypothetical protein (576 aa)    
Predicted Functional Partners:
SMAC_06120
Hypothetical protein (781 aa)
     
 
  0.894
SMAC_01801
Hypothetical protein (1130 aa)
     
 
  0.829
SMAC_09134
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (323 aa)
   
  0.820
SMAC_08569
Hypothetical protein (257 aa)
   
  0.813
SMAC_00898
Hypothetical protein (480 aa)
     
  0.775
SMAC_05110
Hypothetical protein (446 aa)
     
  0.767
SMAC_06223
Hypothetical protein (820 aa)
     
 
  0.760
SMAC_02640
Hypothetical protein (897 aa)
     
 
  0.750
UTP25
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (742 aa)
     
 
    0.713
SMAC_03096
Hypothetical protein (921 aa)
     
 
  0.711
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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