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SMAC_04614 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04614" - TOP1 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04614TOP1 protein (912 aa)    
Predicted Functional Partners:
SMAC_01010
TOP2 protein (1915 aa)
     
 
  0.983
SMAC_07100
Hypothetical protein (772 aa)
     
      0.919
SMAC_01097
Hypothetical protein (476 aa)
     
      0.898
SMAC_05584
Hypothetical protein (157 aa)
       
  0.768
SMAC_03231
Hypothetical protein (1032 aa)
     
  0.766
SMAC_01002
Hypothetical protein (624 aa)
       
 
  0.759
SMAC_04895
SGS1 protein (2276 aa)
     
 
  0.753
SMAC_01766
Hypothetical protein (874 aa)
       
  0.711
SMAC_08473
Hypothetical protein (98 aa)
       
  0.669
SMAC_05830
Hypothetical protein (1013 aa)
     
  0.647
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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