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SMAC_06213 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06213" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06213Hypothetical protein (311 aa)    
Predicted Functional Partners:
SMAC_08679
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1274 aa)
 
  0.998
SMAC_05005
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1761 aa)
   
  0.996
SMAC_00129
Hypothetical protein (160 aa)
   
  0.995
SMAC_05757
Hypothetical protein (84 aa)
   
  0.994
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
   
  0.994
SMAC_01684
Hypothetical protein (234 aa)
   
  0.994
SMAC_02632
Hypothetical protein (140 aa)
     
  0.993
SMAC_03803
Hypothetical protein (152 aa)
     
  0.993
SMAC_04320
Hypothetical protein (171 aa)
     
  0.992
SMAC_12010
Hypothetical protein (69 aa)
   
  0.992
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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