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SMAC_06532 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06532" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06532Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1428 aa)    
Predicted Functional Partners:
SMAC_02163
Hypothetical protein (923 aa)
       
  0.964
SMAC_04662
Hypothetical protein (833 aa)
     
  0.955
SMAC_04403
Hypothetical protein (222 aa)
     
 
  0.938
SMAC_02344
Hypothetical protein (155 aa)
       
  0.887
SMAC_00869
Hypothetical protein (130 aa)
       
  0.882
SMAC_02370
Hypothetical protein (955 aa)
       
0.869
SMAC_06365
Hypothetical protein (584 aa)
     
 
  0.856
SMAC_02142
Hypothetical protein (1549 aa)
     
 
  0.850
SMAC_04973
Hypothetical protein (250 aa)
     
 
  0.846
SMAC_08272
Hypothetical protein (594 aa)
     
  0.802
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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