STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_08544WGS project CABT00000000 data, contig 2.59. (629 aa)    
Predicted Functional Partners:
SMAC_04163
WGS project CABT00000000 data, contig 2.15.
  
 
 0.968
SMAC_09126
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.952
SMAC_01428
WGS project CABT00000000 data, contig 2.4.
   
 0.926
SMAC_08660
WGS project CABT00000000 data, contig 2.61; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.921
SMAC_05780
WGS project CABT00000000 data, contig 2.6.
  
 
 0.919
SMAC_08332
WGS project CABT00000000 data, contig 2.7; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.919
SMAC_08465
WGS project CABT00000000 data, contig 2.58.
 
   
 0.911
SMAC_06215
Glucoamylase.
     
 0.910
SMAC_01752
Glucoamylase.
     
 0.910
SMAC_08188
WGS project CABT00000000 data, contig 2.53; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.906
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.