STRINGSTRING
SMAC_06585 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06585" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06585Hypothetical protein (295 aa)    
Predicted Functional Partners:
SMAC_01901
Hypothetical protein (331 aa)
       
      0.749
SMAC_07644
Translational activator GCN1 (2703 aa)
       
 
  0.625
SMAC_03040
Hypothetical protein (1056 aa)
     
 
  0.590
SMAC_09589
Hypothetical protein (1094 aa)
     
 
  0.590
SMAC_06538
Hypothetical protein (363 aa)
   
 
    0.524
SMAC_09145
Hypothetical protein (279 aa)
       
    0.504
SMAC_01947
Hypothetical protein (302 aa)
         
  0.478
SMAC_04094
Hypothetical protein (468 aa)
       
  0.460
SMAC_10032
Hypothetical protein (382 aa)
       
  0.460
SMAC_08297
Hypothetical protein (528 aa)
       
  0.458
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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