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SMAC_06648 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06648" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06648Hypothetical protein (613 aa)    
Predicted Functional Partners:
SMAC_04961
Hypothetical protein (794 aa)
     
        0.664
ERB1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (743 aa)
     
        0.663
SMAC_07858
Hypothetical protein (490 aa)
     
        0.640
SMAC_09016
Hypothetical protein (580 aa)
     
      0.611
SMAC_07534
Hypothetical protein (1314 aa)
       
      0.556
SMAC_06206
Ribosome biogenesis protein BRX1 (323 aa)
     
        0.537
SMAC_06223
Hypothetical protein (820 aa)
     
        0.516
SMAC_02640
Hypothetical protein (897 aa)
     
        0.515
SMAC_04244
Hypothetical protein (677 aa)
     
        0.499
SMAC_04919
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1239 aa)
     
        0.493
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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