STRINGSTRING
SMAC_04697 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04697" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04697Hypothetical protein (1033 aa)    
Predicted Functional Partners:
SMAC_04506
Hypothetical protein (406 aa)
     
 
  0.925
SMAC_05388
Hypothetical protein (1047 aa)
     
 
  0.774
SMAC_03949
Hypothetical protein (532 aa)
     
 
  0.761
SMAC_04116
HTA1 protein (143 aa)
       
 
  0.750
SMAC_03526
Hypothetical protein (1096 aa)
     
 
  0.741
SMAC_02551
Hypothetical protein (944 aa)
     
 
  0.649
SMAC_08324
HTA2 protein (134 aa)
       
 
  0.599
SMAC_04844
Hypothetical protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (214 aa)
     
 
  0.595
SMAC_08323
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
       
      0.592
SMAC_02943
Hypothetical protein (283 aa)
     
      0.588
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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