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SMAC_04785 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04785" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04785Hypothetical protein (390 aa)    
Predicted Functional Partners:
SMAC_02142
Hypothetical protein (1549 aa)
       
      0.608
SMAC_04407
Hypothetical protein (833 aa)
       
      0.608
SMAC_04973
Hypothetical protein (250 aa)
       
      0.525
SMAC_02575
Hypothetical protein (278 aa)
       
      0.525
SMAC_07065
Hypothetical protein (357 aa)
       
      0.525
SMAC_08294
Hypothetical protein (433 aa)
       
      0.495
SMAC_03445
Hypothetical protein; Binds the poly(A) tail of mRNA (754 aa)
     
   
0.492
SMAC_05557
60S ribosomal protein L5 (307 aa)
       
      0.453
SMAC_02370
Hypothetical protein (955 aa)
       
      0.422
SMAC_06532
Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1428 aa)
       
      0.422
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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