STRINGSTRING
SMAC_05136 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05136" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05136Hypothetical protein (489 aa)    
Predicted Functional Partners:
SMAC_03203
Hypothetical protein (1123 aa)
       
  0.764
SMAC_02366
Hypothetical protein; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
         
  0.669
SMAC_08869
Hypothetical protein (474 aa)
       
  0.612
SMAC_06449
Hypothetical protein (495 aa)
       
  0.557
SMAC_06529
Histidine kinase group protein (1570 aa)
   
 
  0.545
SMAC_04952
Hypothetical protein (476 aa)
       
  0.540
SMAC_01396
Hypothetical protein (334 aa)
       
  0.540
SMAC_01395
Hypothetical protein (155 aa)
       
  0.540
SMAC_12591
Hypothetical protein (375 aa)
       
  0.540
SMAC_07270
Hypothetical protein (484 aa)
       
  0.540
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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