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SMAC_05140 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05140" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05140Hypothetical protein (220 aa)    
Predicted Functional Partners:
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
  0.874
SMAC_00051
DOC1 protein (417 aa)
     
  0.820
SMAC_04064
CDC16 protein (661 aa)
       
  0.813
SMAC_01925
Hypothetical protein (808 aa)
     
  0.811
SMAC_03243
CDC23 protein (757 aa)
       
  0.810
SMAC_00447
Hypothetical protein (1114 aa)
     
  0.809
SMAC_07506
APC1 protein (2084 aa)
     
  0.809
SMAC_00900
Hypothetical protein (409 aa)
     
  0.806
SMAC_05407
APC5 protein (814 aa)
     
  0.796
SMAC_02208
Hypothetical protein (493 aa)
     
  0.786
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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