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SMAC_09218 protein (Sordaria macrospora) - STRING interaction network
"SMAC_09218" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
SMAC_09218Hypothetical protein; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (406 aa)    
Predicted Functional Partners:
SMAC_06156
Hypothetical protein (780 aa)
     
  0.990
SMAC_03427
Hypothetical protein (189 aa)
     
  0.907
SMAC_03426
Hypothetical protein (531 aa)
     
  0.907
SMAC_02792
Hypothetical protein (607 aa)
   
 
  0.892
SMAC_05446
Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (460 aa)
     
  0.856
SMAC_00356
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (312 aa)
       
      0.579
SMAC_06262
40S ribosomal protein S6 (239 aa)
       
 
  0.517
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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