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SMAC_05209 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05209" - MEI9 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05209MEI9 protein (940 aa)    
Predicted Functional Partners:
SMAC_03883
Hypothetical protein (416 aa)
     
  0.979
SMAC_08795
Hypothetical protein (438 aa)
       
  0.968
SMAC_04895
SGS1 protein (2276 aa)
     
  0.887
SMAC_07845
RAD52 protein (631 aa)
       
  0.877
SMAC_05189
MUS81 protein (630 aa)
     
  0.866
SMAC_03669
MSH2 protein; Component of the post-replicative DNA mismatch repair system (MMR) (934 aa)
     
  0.852
SMAC_04277
RAD51 protein (353 aa)
       
  0.849
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.847
SMAC_08059
Rad2 protein (1279 aa)
     
  0.847
SLX1
SLX1 protein; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA (392 aa)
     
  0.827
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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