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SMAC_05226 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05226" - SMC5 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05226SMC5 protein (1140 aa)    
Predicted Functional Partners:
SMAC_08292
SMC6 protein (1199 aa)
     
0.989
SMAC_01338
Hypothetical protein (426 aa)
     
  0.978
SMAC_05444
Hypothetical protein (334 aa)
       
  0.973
SMAC_01010
TOP2 protein (1915 aa)
     
 
  0.919
scc1
MCD1/ SCC1/Rad21 protein (658 aa)
     
  0.918
SMAC_02911
REC8 protein (763 aa)
     
  0.915
SMAC_01999
SMC3 protein (1199 aa)
     
 
  0.908
SMAC_06758
Hypothetical protein (1075 aa)
     
 
  0.907
ycs5
YCG1/YCS5 protein (1286 aa)
     
  0.905
SMAC_08639
Ycs4 protein; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1250 aa)
     
  0.903
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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