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SMAC_05405 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05405" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05405Hypothetical protein (641 aa)    
Predicted Functional Partners:
SMAC_00377
Hypothetical protein (500 aa)
     
  0.909
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.903
NTH1
Base-excision repair protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (805 aa)
 
 
  0.876
SMAC_07714
Hypothetical protein (693 aa)
       
  0.871
SMAC_07713
Hypothetical protein (604 aa)
       
  0.871
SMAC_05541
Hypothetical protein (415 aa)
     
  0.839
SMAC_01002
Hypothetical protein (624 aa)
     
 
  0.831
SMAC_00422
Hypothetical protein (424 aa)
   
  0.812
SMAC_05479
Hypothetical protein (560 aa)
     
  0.810
SMAC_03598
Hypothetical protein (484 aa)
   
 
  0.791
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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