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SMAC_05417 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05417" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05417Hypothetical protein (1350 aa)    
Predicted Functional Partners:
SMAC_05506
Hypothetical protein (1238 aa)
     
    0.562
SMAC_07104
Hypothetical protein (536 aa)
     
    0.562
SMAC_08473
Hypothetical protein (98 aa)
       
    0.561
SMAC_06263
Hypothetical protein (3992 aa)
     
 
    0.556
SMAC_02364
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.548
SMAC_01813
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (149 aa)
       
  0.548
SMAC_05286
Hypothetical protein (103 aa)
       
  0.548
SMAC_00184
RAD50 protein (1317 aa)
     
 
    0.539
SMAC_08324
HTA2 protein (134 aa)
       
  0.538
SMAC_07925
Hypothetical protein (229 aa)
       
  0.536
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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