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SMAC_05446 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05446" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05446Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (460 aa)    
Predicted Functional Partners:
SMAC_02671
Elongation factor 1 gamma domain-containing protein (403 aa)
     
  0.993
SMAC_07431
Hypothetical protein (230 aa)
     
  0.977
SMAC_04198
60S ribosomal protein L3 (392 aa)
   
  0.950
SMAC_02606
60S ribosomal protein L4 (361 aa)
     
  0.948
SMAC_08456
Hypothetical protein (413 aa)
 
 
  0.944
RPS1
40S ribosomal protein S1 (256 aa)
     
  0.926
SMAC_08845
Hypothetical protein (434 aa)
     
  0.916
SMAC_10240
Hypothetical protein (180 aa)
     
  0.904
SMAC_06257
Hypothetical protein (259 aa)
   
 
 
  0.901
SMAC_00852
Hypothetical protein (844 aa)
   
  0.897
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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